Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx1-1G3UXB3 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx1-1G3UXB3 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx1-1G3UXB3 Gm20743-202ENSMUST00000194322 2830 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx1-1G3UXB3 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC9.41□□□□□ -0.9
Nkx1-1G3UXB3 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx1-1G3UXB3 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 AC154314.1-201ENSMUST00000223995 2996 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Ick-204ENSMUST00000118869 2540 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm35755-201ENSMUST00000222392 2077 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Zfp30-201ENSMUST00000032803 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Rpa1-202ENSMUST00000092907 5077 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm37470-201ENSMUST00000193378 2798 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm25877-201ENSMUST00000104326 129 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm7429-201ENSMUST00000118664 348 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm13725-201ENSMUST00000122139 207 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm10177-201ENSMUST00000160052 444 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm4845-201ENSMUST00000179202 562 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm29336-201ENSMUST00000186042 573 ntTSL 2 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm7266-201ENSMUST00000187999 405 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gabra4-203ENSMUST00000198138 440 ntTSL 2 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm45910-201ENSMUST00000212493 1003 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm45859-201ENSMUST00000212794 214 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm19810-201ENSMUST00000218521 251 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 AC157570.3-201ENSMUST00000219281 205 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 AC156559.2-201ENSMUST00000224403 384 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Olfr467-201ENSMUST00000084756 927 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Mir471-201ENSMUST00000093596 67 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Synm-203ENSMUST00000207102 3388 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Rfx2-201ENSMUST00000002444 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Gm43288-201ENSMUST00000197594 2628 ntBASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Bag3-201ENSMUST00000033136 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx1-1G3UXB3 Ddb2-202ENSMUST00000111352 2228 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 Gm44248-201ENSMUST00000203079 1549 ntBASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 Gm20507-201ENSMUST00000163245 2860 ntTSL 2 BASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 Fabp12-201ENSMUST00000029043 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 Snx25-207ENSMUST00000170416 3067 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 CT025645.1-201ENSMUST00000222760 4322 ntBASIC9.4□□□□□ -0.91
Nkx1-1G3UXB3 AC164625.1-201ENSMUST00000214034 3036 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Pcdhb12-201ENSMUST00000055495 3034 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 AC154270.2-201ENSMUST00000226755 2306 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm26704-201ENSMUST00000181362 2901 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Zfp114-201ENSMUST00000086010 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Pcdhga7-202ENSMUST00000193476 3044 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Mpp2-202ENSMUST00000100398 3577 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Mir760-201ENSMUST00000103257 119 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm24867-201ENSMUST00000104161 107 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm15026-201ENSMUST00000119219 458 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm12482-201ENSMUST00000120435 630 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm12632-201ENSMUST00000121223 495 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm15959-201ENSMUST00000121724 368 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm22424-201ENSMUST00000158527 87 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm18875-201ENSMUST00000188563 882 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm5541-201ENSMUST00000193248 1113 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm44265-201ENSMUST00000203631 465 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm7394-201ENSMUST00000209138 1032 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm10813-201ENSMUST00000099936 90 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Gm31024-201ENSMUST00000207600 2353 ntBASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 5430416N02Rik-201ENSMUST00000180779 3486 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nkx1-1G3UXB3 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms