Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm43604-201ENSMUST00000199799 705 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a3E9PWQ3 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Scarna13-201ENSMUST00000158164 275 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm27189-201ENSMUST00000184119 190 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm37445-201ENSMUST00000195318 242 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm44053-201ENSMUST00000203364 929 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Dopey2-207ENSMUST00000227156 7340 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm26167-201ENSMUST00000158423 253 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm43744-201ENSMUST00000196387 688 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm6820-201ENSMUST00000188803 2173 ntBASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a3E9PWQ3 Gm26684-202ENSMUST00000228229 8257 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm29124-201ENSMUST00000186576 452 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm44852-201ENSMUST00000207950 369 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Nmnat2-201ENSMUST00000043313 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 AC153729.1-201ENSMUST00000214055 2562 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm5080-201ENSMUST00000220341 743 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms