Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx3-1P97436 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm10936-201ENSMUST00000105264 252 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm13770-201ENSMUST00000117149 305 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm3943-201ENSMUST00000118606 718 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm13493-201ENSMUST00000120318 493 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm12936-201ENSMUST00000121439 301 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm23553-201ENSMUST00000157817 295 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm5430-201ENSMUST00000182525 915 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm37308-201ENSMUST00000194684 100 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm6070-201ENSMUST00000207275 419 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 AC153937.1-201ENSMUST00000218734 412 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Mir331-201ENSMUST00000083673 96 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.13□□□□□ -1.59
Nkx3-1P97436 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Nkx3-1P97436 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm24886-201ENSMUST00000104384 123 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm14220-201ENSMUST00000118114 449 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm6081-201ENSMUST00000134472 489 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm18407-201ENSMUST00000192126 790 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm43054-201ENSMUST00000199495 884 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Mir219c-201ENSMUST00000199860 60 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm32158-201ENSMUST00000200135 404 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm44432-201ENSMUST00000203342 938 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm45596-201ENSMUST00000209279 434 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Gm45874-201ENSMUST00000212423 346 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.12□□□□□ -1.59
Nkx3-1P97436 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.12□□□□□ -1.59
Nkx3-1P97436 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms