Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Sox3P53784 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Sox3P53784 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Sox3P53784 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Sox3P53784 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 Gm25345-201ENSMUST00000104505 133 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm14356-201ENSMUST00000118322 869 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 Gm12115-201ENSMUST00000119969 447 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm12808-201ENSMUST00000120597 404 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.7□□□□□ -1.5
Sox3P53784 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.7□□□□□ -1.5
Sox3P53784 Mir1970-201ENSMUST00000157839 104 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm23259-201ENSMUST00000158318 303 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm24359-201ENSMUST00000158418 221 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm3242-201ENSMUST00000171273 485 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Mir5125-201ENSMUST00000175240 79 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.7□□□□□ -1.5
Sox3P53784 Gm8869-201ENSMUST00000195222 947 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm7626-201ENSMUST00000195801 353 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.7□□□□□ -1.5
Sox3P53784 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.7□□□□□ -1.5
Sox3P53784 Gm44330-201ENSMUST00000200106 143 ntBASIC5.7□□□□□ -1.5
Sox3P53784 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 Gm7890-201ENSMUST00000204877 601 ntBASIC5.7□□□□□ -1.5
Sox3P53784 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.7□□□□□ -1.5
Sox3P53784 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 Gm5830-201ENSMUST00000049117 443 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm25682-201ENSMUST00000083942 164 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Sox3P53784 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.7□□□□□ -1.5
Sox3P53784 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.69□□□□□ -1.5
Sox3P53784 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.69□□□□□ -1.5
Sox3P53784 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Sox3P53784 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.69□□□□□ -1.5
Sox3P53784 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sox3P53784 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Mir1188-201ENSMUST00000116756 120 ntBASIC5.69□□□□□ -1.5
Sox3P53784 Gm15331-201ENSMUST00000120225 385 ntBASIC5.69□□□□□ -1.5
Sox3P53784 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Gm21990-201ENSMUST00000124692 383 ntBASIC5.69□□□□□ -1.5
Sox3P53784 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.69□□□□□ -1.5
Sox3P53784 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.69□□□□□ -1.5
Sox3P53784 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.69□□□□□ -1.5
Sox3P53784 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.69□□□□□ -1.5
Sox3P53784 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.69□□□□□ -1.5
Sox3P53784 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.69□□□□□ -1.5
Sox3P53784 Gm9321-201ENSMUST00000221179 778 ntBASIC5.69□□□□□ -1.5
Sox3P53784 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Sox3P53784 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sox3P53784 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.69□□□□□ -1.5
Sox3P53784 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sox3P53784 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.69□□□□□ -1.5
Sox3P53784 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.69□□□□□ -1.5
Sox3P53784 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox3P53784 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox3P53784 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox3P53784 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Sox3P53784 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Sox3P53784 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox3P53784 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.68□□□□□ -1.5
Sox3P53784 Gm16200-201ENSMUST00000120385 331 ntBASIC5.68□□□□□ -1.5
Sox3P53784 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.68□□□□□ -1.5
Sox3P53784 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox3P53784 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms