Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Sox1P53783 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.03□□□□□ -1.28
Sox1P53783 Gm42606-201ENSMUST00000114209 239 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm22195-201ENSMUST00000116861 108 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm5381-201ENSMUST00000117975 1250 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm12447-201ENSMUST00000119110 470 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm14939-201ENSMUST00000120347 680 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm3810-201ENSMUST00000122413 476 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.03□□□□□ -1.28
Sox1P53783 Gm24236-201ENSMUST00000157794 134 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm17177-201ENSMUST00000169144 483 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.03□□□□□ -1.28
Sox1P53783 Mrgprb13-201ENSMUST00000188191 985 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm7142-201ENSMUST00000194232 586 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.03□□□□□ -1.28
Sox1P53783 Gm43345-201ENSMUST00000199484 269 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm43228-201ENSMUST00000200735 264 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm44449-201ENSMUST00000203610 153 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm2089-201ENSMUST00000218294 479 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm46364-201ENSMUST00000218548 319 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm9118-201ENSMUST00000219246 754 ntBASIC7.03□□□□□ -1.28
Sox1P53783 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.03□□□□□ -1.28
Sox1P53783 AC116589.3-202ENSMUST00000221770 649 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.03□□□□□ -1.28
Sox1P53783 AC116589.6-201ENSMUST00000222252 649 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC7.03□□□□□ -1.28
Sox1P53783 CT009713.5-201ENSMUST00000224508 909 ntBASIC7.03□□□□□ -1.28
Sox1P53783 AC161252.2-201ENSMUST00000224978 374 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Sox1P53783 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Sox1P53783 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Malat1-201ENSMUST00000172812 6983 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Gm38339-201ENSMUST00000195479 1829 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sox1P53783 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC7.03□□□□□ -1.28
Sox1P53783 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sox1P53783 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
Sox1P53783 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.28
Sox1P53783 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.28
Sox1P53783 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm38331-201ENSMUST00000195719 2671 ntBASIC7.02□□□□□ -1.29
Sox1P53783 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm9836-201ENSMUST00000117132 216 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Gm13614-201ENSMUST00000117306 503 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Gm12131-201ENSMUST00000117479 359 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC7.02□□□□□ -1.29
Sox1P53783 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm23662-201ENSMUST00000158046 111 ntBASIC7.02□□□□□ -1.29
Sox1P53783 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm42886-201ENSMUST00000199214 466 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Gm18995-201ENSMUST00000202981 520 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Gm7825-201ENSMUST00000204046 416 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox1P53783 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox1P53783 CT030030.1-201ENSMUST00000218809 152 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm8256-203ENSMUST00000228692 591 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox1P53783 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox1P53783 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox1P53783 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox1P53783 Gm7134-201ENSMUST00000122296 2406 ntBASIC7.02□□□□□ -1.29
Sox1P53783 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox1P53783 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms