Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm33312-201ENSMUST00000222443 332 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm10221-201ENSMUST00000088299 309 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Shmt1P50431 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Shmt1P50431 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Shmt1P50431 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm23739-201ENSMUST00000102295 108 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Gm15332-201ENSMUST00000118386 357 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Gm4910-201ENSMUST00000119605 366 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Gm15781-201ENSMUST00000120216 323 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Shmt1P50431 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.54□□□□□ -1.36
Shmt1P50431 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm44312-201ENSMUST00000203536 469 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Gm44225-201ENSMUST00000203582 186 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm18467-201ENSMUST00000208805 434 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm19154-201ENSMUST00000223330 940 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 AV026068-216ENSMUST00000223874 328 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 AV026068-218ENSMUST00000223980 575 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm8526-201ENSMUST00000079153 475 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.54□□□□□ -1.36
Shmt1P50431 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Shmt1P50431 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Shmt1P50431 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Shmt1P50431 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Shmt1P50431 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.54□□□□□ -1.36
Shmt1P50431 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Shmt1P50431 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Shmt1P50431 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Shmt1P50431 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Shmt1P50431 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Shmt1P50431 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Shmt1P50431 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Shmt1P50431 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm13193-201ENSMUST00000117275 225 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm14331-201ENSMUST00000120396 409 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm12096-201ENSMUST00000121149 829 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm11389-201ENSMUST00000121407 430 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm7931-201ENSMUST00000121537 271 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.53□□□□□ -1.36
Shmt1P50431 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Shmt1P50431 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms