Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm43436-201ENSMUST00000199308 147 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm43384-201ENSMUST00000200569 637 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm43897-201ENSMUST00000204019 309 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm45100-201ENSMUST00000209153 391 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm8106-201ENSMUST00000213123 523 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm18503-201ENSMUST00000220340 728 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Mif-ps7-201ENSMUST00000223357 327 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 AC166830.1-201ENSMUST00000224201 533 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 AC154747.1-201ENSMUST00000225265 239 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC7.84□□□□□ -1.15
Rfx1P48377 AW822073-201ENSMUST00000075305 555 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm24144-201ENSMUST00000082632 111 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Rfx1P48377 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Rfx1P48377 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Rfx1P48377 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Rfx1P48377 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.84□□□□□ -1.16
Rfx1P48377 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
Rfx1P48377 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Rfx1P48377 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Rfx1P48377 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.83□□□□□ -1.16
Rfx1P48377 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC7.83□□□□□ -1.16
Rfx1P48377 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC7.83□□□□□ -1.16
Rfx1P48377 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Rfx1P48377 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Rfx1P48377 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Mir503-201ENSMUST00000102168 71 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Rfx1P48377 Mir466i-201ENSMUST00000116924 121 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm14865-201ENSMUST00000117523 494 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm14870-201ENSMUST00000118414 156 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm15785-201ENSMUST00000119145 694 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm12219-201ENSMUST00000119198 443 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.83□□□□□ -1.16
Rfx1P48377 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm22793-201ENSMUST00000157227 330 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm20549-201ENSMUST00000174804 429 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm27964-201ENSMUST00000185195 62 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm29160-201ENSMUST00000190094 699 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm44227-201ENSMUST00000203576 241 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 AL772265.1-201ENSMUST00000214379 305 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Rfx1P48377 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.83□□□□□ -1.16
Rfx1P48377 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rfx1P48377 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms