Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm5809-201ENSMUST00000121854 529 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Gm13007-201ENSMUST00000121866 365 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Mir1907-201ENSMUST00000122509 90 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm21241-201ENSMUST00000179551 934 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Gm22917-201ENSMUST00000180116 110 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm20819-201ENSMUST00000191091 925 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Gm20871-201ENSMUST00000191322 931 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm7825-201ENSMUST00000204046 416 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdx2P43241 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdx2P43241 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Cdx2P43241 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdx2P43241 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdx2P43241 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.63□□□□□ -1.51
Cdx2P43241 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdx2P43241 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdx2P43241 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdx2P43241 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.63□□□□□ -1.51
Cdx2P43241 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx2P43241 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.62□□□□□ -1.51
Cdx2P43241 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Gm4989-201ENSMUST00000118711 749 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.62□□□□□ -1.51
Cdx2P43241 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Cdx2P43241 Gm11197-201ENSMUST00000145158 839 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Gm29284-201ENSMUST00000188363 255 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Gm18969-201ENSMUST00000189423 730 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.62□□□□□ -1.51
Cdx2P43241 Gm38291-201ENSMUST00000193671 259 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Gm18007-201ENSMUST00000205019 844 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.62□□□□□ -1.51
Cdx2P43241 Gm4587-201ENSMUST00000209135 637 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Gm45525-201ENSMUST00000210800 389 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Cdx2P43241 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.62□□□□□ -1.51
Cdx2P43241 Gm7042-201ENSMUST00000223027 384 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.62□□□□□ -1.51
Cdx2P43241 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.62□□□□□ -1.51
Cdx2P43241 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.62□□□□□ -1.51
Cdx2P43241 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx2P43241 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms