Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Col18a1P39061 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC7.95□□□□□ -1.14
Col18a1P39061 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC7.95□□□□□ -1.14
Col18a1P39061 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col18a1P39061 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col18a1P39061 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.95□□□□□ -1.14
Col18a1P39061 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col18a1P39061 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col18a1P39061 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC7.95□□□□□ -1.14
Col18a1P39061 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col18a1P39061 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.95□□□□□ -1.14
Col18a1P39061 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm11366-201ENSMUST00000119279 429 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm13118-201ENSMUST00000120402 549 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm22235-201ENSMUST00000157085 110 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Mir6975-201ENSMUST00000184879 61 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm37421-201ENSMUST00000193088 132 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Trbv27-201ENSMUST00000193711 277 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm43036-201ENSMUST00000200594 373 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm44833-201ENSMUST00000208368 331 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 AC153516.1-201ENSMUST00000217955 779 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 AC116589.3-202ENSMUST00000221770 649 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 AC116589.6-201ENSMUST00000222252 649 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 AC154636.1-201ENSMUST00000223226 126 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Col18a1P39061 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Col18a1P39061 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm11854-201ENSMUST00000117839 446 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm14358-201ENSMUST00000118458 403 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm13679-201ENSMUST00000118678 484 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm14603-201ENSMUST00000121275 448 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr331-202ENSMUST00000170501 957 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm27541-201ENSMUST00000184078 122 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm19002-201ENSMUST00000192649 1012 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm43774-201ENSMUST00000196327 878 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm43104-201ENSMUST00000197234 311 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Mir5121-201ENSMUST00000198528 74 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm15903-202ENSMUST00000199631 3518 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm34165-201ENSMUST00000222012 1174 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 AV026068-220ENSMUST00000224153 1147 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 AV026068-224ENSMUST00000224827 928 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 AC160980.2-201ENSMUST00000225131 949 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm23238-201ENSMUST00000083007 164 ntBASIC7.94□□□□□ -1.14
Col18a1P39061 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Col18a1P39061 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Col18a1P39061 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col18a1P39061 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Col18a1P39061 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col18a1P39061 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Col18a1P39061 Gm37894-201ENSMUST00000195416 2599 ntBASIC7.93□□□□□ -1.14
Col18a1P39061 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col18a1P39061 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.93□□□□□ -1.14
Col18a1P39061 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col18a1P39061 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col18a1P39061 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
Col18a1P39061 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms