Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmg20bQ9Z104 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Hmg20bQ9Z104 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmg20bQ9Z104 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmg20bQ9Z104 Dio3-201ENSMUST00000097228 1449 ntBASIC21.14■□□□□ 0.98
Hmg20bQ9Z104 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmg20bQ9Z104 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmg20bQ9Z104 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmg20bQ9Z104 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmg20bQ9Z104 Gm8969-201ENSMUST00000199694 526 ntBASIC21.14■□□□□ 0.97
Hmg20bQ9Z104 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Hmg20bQ9Z104 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmg20bQ9Z104 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hmg20bQ9Z104 Idnk-204ENSMUST00000226010 1898 ntBASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmg20bQ9Z104 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Hmg20bQ9Z104 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hmg20bQ9Z104 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Hmg20bQ9Z104 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmg20bQ9Z104 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hmg20bQ9Z104 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmg20bQ9Z104 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.1■□□□□ 0.97
Hmg20bQ9Z104 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20bQ9Z104 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.1■□□□□ 0.97
Hmg20bQ9Z104 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20bQ9Z104 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.1■□□□□ 0.97
Hmg20bQ9Z104 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20bQ9Z104 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20bQ9Z104 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20bQ9Z104 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hmg20bQ9Z104 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmg20bQ9Z104 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
Hmg20bQ9Z104 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.09■□□□□ 0.97
Hmg20bQ9Z104 Mir2861-201ENSMUST00000175539 82 ntBASIC21.09■□□□□ 0.97
Hmg20bQ9Z104 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms