Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Gm3375-201ENSMUST00000203929 796 ntBASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcb1Q9Z0H3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.58■□□□□ 0.57
Smarcb1Q9Z0H3 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.58■□□□□ 0.57
Smarcb1Q9Z0H3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcb1Q9Z0H3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcb1Q9Z0H3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Gm30025-201ENSMUST00000218555 728 ntBASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcb1Q9Z0H3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcb1Q9Z0H3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Gm6433-201ENSMUST00000118634 875 ntBASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Gm10517-202ENSMUST00000192970 758 ntBASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcb1Q9Z0H3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcb1Q9Z0H3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.54■□□□□ 0.56
Smarcb1Q9Z0H3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcb1Q9Z0H3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcb1Q9Z0H3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smarcb1Q9Z0H3 Gm4974-201ENSMUST00000209974 875 ntBASIC18.53■□□□□ 0.56
Smarcb1Q9Z0H3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms