Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Gm2559-201ENSMUST00000201323 363 ntBASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn3Q9Z0G9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cldn3Q9Z0G9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Cldn3Q9Z0G9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn3Q9Z0G9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn3Q9Z0G9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Gm38285-201ENSMUST00000192928 922 ntBASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Zfp783-201ENSMUST00000095946 670 ntBASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn3Q9Z0G9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn3Q9Z0G9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn3Q9Z0G9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms