Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn5Q9WVD4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn5Q9WVD4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn5Q9WVD4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Gm11539-201ENSMUST00000119837 557 ntBASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Gm13436-201ENSMUST00000120418 567 ntBASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn5Q9WVD4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 Odf3b-204ENSMUST00000227834 930 ntBASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn5Q9WVD4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn5Q9WVD4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.52■□□□□ 0.55
Clcn5Q9WVD4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn5Q9WVD4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn5Q9WVD4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn5Q9WVD4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn5Q9WVD4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn5Q9WVD4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn5Q9WVD4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn5Q9WVD4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn5Q9WVD4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.5■□□□□ 0.55
Clcn5Q9WVD4 Gm7889-201ENSMUST00000185591 958 ntBASIC18.5■□□□□ 0.55
Clcn5Q9WVD4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.5■□□□□ 0.55
Clcn5Q9WVD4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn5Q9WVD4 Gm43183-201ENSMUST00000200632 547 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms