Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ClcnkaQ9WUB7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Gm5408-201ENSMUST00000197998 747 ntBASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.48■□□□□ 0.23
ClcnkaQ9WUB7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Gm26524-201ENSMUST00000192339 390 ntBASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClcnkaQ9WUB7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClcnkaQ9WUB7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
ClcnkaQ9WUB7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Rab3c-203ENSMUST00000224180 967 ntBASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClcnkaQ9WUB7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.44■□□□□ 0.22
ClcnkaQ9WUB7 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 319.8 ms