Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubd1Q9R1K7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.28■□□□□ 0.52
Tubd1Q9R1K7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubd1Q9R1K7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubd1Q9R1K7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tubd1Q9R1K7 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.28■□□□□ 0.52
Tubd1Q9R1K7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.28■□□□□ 0.52
Tubd1Q9R1K7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Gm18666-201ENSMUST00000190039 958 ntBASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tubd1Q9R1K7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Tubd1Q9R1K7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Gm5643-201ENSMUST00000117081 966 ntBASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Gm10653-202ENSMUST00000139570 835 ntBASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubd1Q9R1K7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubd1Q9R1K7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubd1Q9R1K7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Gm20760-201ENSMUST00000179197 648 ntBASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Gm18025-201ENSMUST00000221733 862 ntBASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.23■□□□□ 0.51
Tubd1Q9R1K7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubd1Q9R1K7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Tubd1Q9R1K7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms