Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Gm13148-201ENSMUST00000118892 745 ntBASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Gm6365-201ENSMUST00000054711 744 ntBASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn2Q9R0A1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Tgds-204ENSMUST00000228543 1594 ntBASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Gm7290-201ENSMUST00000104990 617 ntBASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Gm12918-201ENSMUST00000120234 636 ntBASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Gm15710-201ENSMUST00000121821 636 ntBASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Gm5075-201ENSMUST00000196916 622 ntBASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Clcn2Q9R0A1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Clcn2Q9R0A1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn2Q9R0A1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn2Q9R0A1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn2Q9R0A1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn2Q9R0A1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn2Q9R0A1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn2Q9R0A1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms