Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Gm18671-201ENSMUST00000214826 683 ntBASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ercc4Q9QZD4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Gm10849-201ENSMUST00000100397 618 ntBASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc4Q9QZD4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc4Q9QZD4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Gm18284-201ENSMUST00000172604 624 ntBASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.43■□□□□ 0.7
Ercc4Q9QZD4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 AV356131-201ENSMUST00000206201 750 ntBASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc4Q9QZD4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc4Q9QZD4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc4Q9QZD4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc4Q9QZD4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc4Q9QZD4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc4Q9QZD4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc4Q9QZD4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc4Q9QZD4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc4Q9QZD4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc4Q9QZD4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms