Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Vps29Q9QZ88 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps29Q9QZ88 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps29Q9QZ88 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps29Q9QZ88 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps29Q9QZ88 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps29Q9QZ88 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps29Q9QZ88 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.13■□□□□ 0.33
Vps29Q9QZ88 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms