Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Timp4Q9JHB3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Timp4Q9JHB3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Timp4Q9JHB3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Gm21814-202ENSMUST00000203277 873 ntBASIC18.63■□□□□ 0.57
Timp4Q9JHB3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Timp4Q9JHB3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Gm5417-201ENSMUST00000079706 384 ntBASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Timp4Q9JHB3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.61■□□□□ 0.57
Timp4Q9JHB3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Gm11643-201ENSMUST00000119578 864 ntBASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Timp4Q9JHB3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Timp4Q9JHB3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms