Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Gm10138-203ENSMUST00000206952 366 ntBASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.8■■□□□ 1.08
Ripk4Q9ERK0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk4Q9ERK0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Mir5122-201ENSMUST00000175004 89 ntBASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ripk4Q9ERK0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ripk4Q9ERK0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ripk4Q9ERK0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk4Q9ERK0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ripk4Q9ERK0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ripk4Q9ERK0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ripk4Q9ERK0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.74■■□□□ 1.07
Ripk4Q9ERK0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ripk4Q9ERK0 Gm15375-201ENSMUST00000119510 849 ntBASIC21.74■■□□□ 1.07
Ripk4Q9ERK0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.74■■□□□ 1.07
Ripk4Q9ERK0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms