Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lime1Q9EQR5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.61■□□□□ 0.09
Lime1Q9EQR5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lime1Q9EQR5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Lime1Q9EQR5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lime1Q9EQR5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lime1Q9EQR5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.58■□□□□ 0.09
Lime1Q9EQR5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Gm10493-201ENSMUST00000097270 612 ntBASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lime1Q9EQR5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.57■□□□□ 0.08
Lime1Q9EQR5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lime1Q9EQR5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lime1Q9EQR5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lime1Q9EQR5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Lime1Q9EQR5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lime1Q9EQR5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lime1Q9EQR5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms