Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Vps35Q9EQH3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Vps35Q9EQH3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Vps35Q9EQH3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Gm2399-201ENSMUST00000104944 225 ntBASIC17.95■□□□□ 0.46
Vps35Q9EQH3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps35Q9EQH3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Gm2559-201ENSMUST00000201323 363 ntBASIC17.94■□□□□ 0.46
Vps35Q9EQH3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps35Q9EQH3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Gm12527-201ENSMUST00000117967 564 ntBASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps35Q9EQH3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps35Q9EQH3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps35Q9EQH3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Dio3-201ENSMUST00000097228 1449 ntBASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps35Q9EQH3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms