Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Gm22238-201ENSMUST00000175222 88 ntBASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Hmg20aQ9DC33 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmg20aQ9DC33 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.4■□□□□ 0.22
Hmg20aQ9DC33 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hmg20aQ9DC33 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmg20aQ9DC33 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmg20aQ9DC33 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmg20aQ9DC33 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmg20aQ9DC33 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hmg20aQ9DC33 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.39■□□□□ 0.21
Hmg20aQ9DC33 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hmg20aQ9DC33 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmg20aQ9DC33 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmg20aQ9DC33 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms