Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ssmem1Q9D9Y8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Mtag2-201ENSMUST00000058665 714 ntBASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ssmem1Q9D9Y8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Gm15378-201ENSMUST00000121894 207 ntBASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Tgds-204ENSMUST00000228543 1594 ntBASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Gm10812-201ENSMUST00000099864 546 ntBASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ssmem1Q9D9Y8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Gm15375-201ENSMUST00000119510 849 ntBASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ssmem1Q9D9Y8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ssmem1Q9D9Y8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Ssmem1Q9D9Y8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Ssmem1Q9D9Y8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Mir6349-201ENSMUST00000184059 97 ntBASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ssmem1Q9D9Y8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms