Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm29241-201ENSMUST00000189260 1096 ntBASIC23.57■■□□□ 1.36
U2af1Q9D883 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
U2af1Q9D883 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC23.57■■□□□ 1.36
U2af1Q9D883 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
U2af1Q9D883 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.56■■□□□ 1.36
U2af1Q9D883 Gm5112-201ENSMUST00000204407 2368 ntBASIC23.56■■□□□ 1.36
U2af1Q9D883 Gm37292-201ENSMUST00000192062 758 ntBASIC23.56■■□□□ 1.36
U2af1Q9D883 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
U2af1Q9D883 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
U2af1Q9D883 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
U2af1Q9D883 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
U2af1Q9D883 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
U2af1Q9D883 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2af1Q9D883 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC23.55■■□□□ 1.36
U2af1Q9D883 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
U2af1Q9D883 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2af1Q9D883 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
U2af1Q9D883 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC23.55■■□□□ 1.36
U2af1Q9D883 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
U2af1Q9D883 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
U2af1Q9D883 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC23.54■■□□□ 1.36
U2af1Q9D883 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC23.54■■□□□ 1.36
U2af1Q9D883 Mir1199-201ENSMUST00000117015 119 ntBASIC23.54■■□□□ 1.36
U2af1Q9D883 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
U2af1Q9D883 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
U2af1Q9D883 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC23.54■■□□□ 1.36
U2af1Q9D883 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
U2af1Q9D883 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
U2af1Q9D883 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
U2af1Q9D883 AC123834.2-201ENSMUST00000224038 2340 ntBASIC23.53■■□□□ 1.36
U2af1Q9D883 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
U2af1Q9D883 Gm6576-201ENSMUST00000169678 883 ntBASIC23.53■■□□□ 1.36
U2af1Q9D883 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.53■■□□□ 1.36
U2af1Q9D883 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC23.53■■□□□ 1.36
U2af1Q9D883 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
U2af1Q9D883 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
U2af1Q9D883 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
U2af1Q9D883 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
U2af1Q9D883 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
U2af1Q9D883 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
U2af1Q9D883 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC23.52■■□□□ 1.36
U2af1Q9D883 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.52■■□□□ 1.36
U2af1Q9D883 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
U2af1Q9D883 AC166341.7-201ENSMUST00000221698 126 ntBASIC23.52■■□□□ 1.36
U2af1Q9D883 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
U2af1Q9D883 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC23.52■■□□□ 1.36
U2af1Q9D883 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
U2af1Q9D883 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
U2af1Q9D883 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC23.51■■□□□ 1.35
U2af1Q9D883 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
U2af1Q9D883 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
U2af1Q9D883 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
U2af1Q9D883 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
U2af1Q9D883 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
U2af1Q9D883 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
U2af1Q9D883 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.51■■□□□ 1.35
U2af1Q9D883 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
U2af1Q9D883 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
U2af1Q9D883 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
U2af1Q9D883 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
U2af1Q9D883 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
U2af1Q9D883 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
U2af1Q9D883 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.5■■□□□ 1.35
U2af1Q9D883 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
U2af1Q9D883 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
U2af1Q9D883 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC23.5■■□□□ 1.35
U2af1Q9D883 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
U2af1Q9D883 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
U2af1Q9D883 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
U2af1Q9D883 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
U2af1Q9D883 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
U2af1Q9D883 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
U2af1Q9D883 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
U2af1Q9D883 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC23.49■■□□□ 1.35
U2af1Q9D883 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
U2af1Q9D883 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
U2af1Q9D883 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC23.49■■□□□ 1.35
U2af1Q9D883 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC23.49■■□□□ 1.35
U2af1Q9D883 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
U2af1Q9D883 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
U2af1Q9D883 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
U2af1Q9D883 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
U2af1Q9D883 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
U2af1Q9D883 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms