Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Echdc3Q9D7J9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Echdc3Q9D7J9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Echdc3Q9D7J9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Echdc3Q9D7J9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Echdc3Q9D7J9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Echdc3Q9D7J9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Echdc3Q9D7J9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Echdc3Q9D7J9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Echdc3Q9D7J9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Echdc3Q9D7J9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Echdc3Q9D7J9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Echdc3Q9D7J9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Echdc3Q9D7J9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Echdc3Q9D7J9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Echdc3Q9D7J9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Echdc3Q9D7J9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Echdc3Q9D7J9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Echdc3Q9D7J9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Echdc3Q9D7J9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms