Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim42Q9D2H5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim42Q9D2H5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.9■□□□□ 0.46
Trim42Q9D2H5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim42Q9D2H5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim42Q9D2H5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim42Q9D2H5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Gm43137-201ENSMUST00000198052 594 ntBASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Tgds-204ENSMUST00000228543 1594 ntBASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.86■□□□□ 0.45
Trim42Q9D2H5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim42Q9D2H5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms