Protein–RNA interactions for Protein: Q9D236

Htra3, Serine protease HTRA3, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra3Q9D236 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Htra3Q9D236 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Htra3Q9D236 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Htra3Q9D236 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Htra3Q9D236 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Htra3Q9D236 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Htra3Q9D236 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Htra3Q9D236 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Htra3Q9D236 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Htra3Q9D236 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Htra3Q9D236 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Htra3Q9D236 Gm14057-201ENSMUST00000120631 482 ntBASIC19.28■□□□□ 0.68
Htra3Q9D236 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Htra3Q9D236 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Htra3Q9D236 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Htra3Q9D236 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Htra3Q9D236 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Htra3Q9D236 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.27■□□□□ 0.68
Htra3Q9D236 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Htra3Q9D236 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.27■□□□□ 0.68
Htra3Q9D236 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.27■□□□□ 0.68
Htra3Q9D236 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.27■□□□□ 0.68
Htra3Q9D236 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Htra3Q9D236 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Htra3Q9D236 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Htra3Q9D236 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.27■□□□□ 0.67
Htra3Q9D236 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Htra3Q9D236 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Htra3Q9D236 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Htra3Q9D236 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Htra3Q9D236 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Htra3Q9D236 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.26■□□□□ 0.67
Htra3Q9D236 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.26■□□□□ 0.67
Htra3Q9D236 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Htra3Q9D236 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Htra3Q9D236 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Htra3Q9D236 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Htra3Q9D236 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Htra3Q9D236 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.25■□□□□ 0.67
Htra3Q9D236 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Htra3Q9D236 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.25■□□□□ 0.67
Htra3Q9D236 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Htra3Q9D236 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Htra3Q9D236 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.25■□□□□ 0.67
Htra3Q9D236 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Htra3Q9D236 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Htra3Q9D236 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Htra3Q9D236 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Htra3Q9D236 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.24■□□□□ 0.67
Htra3Q9D236 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.24■□□□□ 0.67
Htra3Q9D236 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Htra3Q9D236 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Htra3Q9D236 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Htra3Q9D236 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Htra3Q9D236 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.23■□□□□ 0.67
Htra3Q9D236 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Htra3Q9D236 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.23■□□□□ 0.67
Htra3Q9D236 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.23■□□□□ 0.67
Htra3Q9D236 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.23■□□□□ 0.67
Htra3Q9D236 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Htra3Q9D236 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.23■□□□□ 0.67
Htra3Q9D236 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Htra3Q9D236 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.23■□□□□ 0.67
Htra3Q9D236 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Htra3Q9D236 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Htra3Q9D236 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Htra3Q9D236 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.22■□□□□ 0.67
Htra3Q9D236 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Htra3Q9D236 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Htra3Q9D236 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.22■□□□□ 0.67
Htra3Q9D236 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Htra3Q9D236 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Htra3Q9D236 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Htra3Q9D236 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.22■□□□□ 0.67
Htra3Q9D236 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.22■□□□□ 0.67
Htra3Q9D236 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Htra3Q9D236 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Htra3Q9D236 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Htra3Q9D236 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Htra3Q9D236 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Htra3Q9D236 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms