Protein–RNA interactions for Protein: Q9CXZ1

Ndufs4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufs4Q9CXZ1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufs4Q9CXZ1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufs4Q9CXZ1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Fst-202ENSMUST00000223640 2612 ntBASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufs4Q9CXZ1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufs4Q9CXZ1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Dio3-201ENSMUST00000097228 1449 ntBASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufs4Q9CXZ1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Gm27275-201ENSMUST00000184318 272 ntBASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufs4Q9CXZ1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Grk6-206ENSMUST00000224995 2971 ntBASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Zfp783-201ENSMUST00000095946 670 ntBASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufs4Q9CXZ1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Gm11927-201ENSMUST00000118472 759 ntBASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Gm38285-201ENSMUST00000192928 922 ntBASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufs4Q9CXZ1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms