Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.3■□□□□ 0.84
Chd1lQ9CXF7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1lQ9CXF7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1lQ9CXF7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1lQ9CXF7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chd1lQ9CXF7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd1lQ9CXF7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd1lQ9CXF7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Chd1lQ9CXF7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd1lQ9CXF7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chd1lQ9CXF7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd1lQ9CXF7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Chd1lQ9CXF7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.26■□□□□ 0.83
Chd1lQ9CXF7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd1lQ9CXF7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Gm43173-201ENSMUST00000202246 593 ntBASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd1lQ9CXF7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms