Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ddx47Q9CWX9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx47Q9CWX9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx47Q9CWX9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Gm43137-201ENSMUST00000198052 594 ntBASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx47Q9CWX9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Smad6-203ENSMUST00000179458 273 ntBASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx47Q9CWX9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Ddx47Q9CWX9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Ddx47Q9CWX9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx47Q9CWX9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx47Q9CWX9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ddx47Q9CWX9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx47Q9CWX9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx47Q9CWX9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx47Q9CWX9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.43■□□□□ 0.54
Ddx47Q9CWX9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx47Q9CWX9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx47Q9CWX9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx47Q9CWX9 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.43■□□□□ 0.54
Ddx47Q9CWX9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx47Q9CWX9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms