Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Khdc3Q9CWU5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc3Q9CWU5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc3Q9CWU5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc3Q9CWU5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc3Q9CWU5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc3Q9CWU5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc3Q9CWU5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc3Q9CWU5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Gm13148-201ENSMUST00000118892 745 ntBASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.21■□□□□ 0.35
Khdc3Q9CWU5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Khdc3Q9CWU5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc3Q9CWU5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Khdc3Q9CWU5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Khdc3Q9CWU5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Khdc3Q9CWU5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Tgds-204ENSMUST00000228543 1594 ntBASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Khdc3Q9CWU5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms