Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc43Q9CR29 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc43Q9CR29 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.96■□□□□ 0.79
Ccdc43Q9CR29 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc43Q9CR29 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc43Q9CR29 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc43Q9CR29 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc43Q9CR29 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc43Q9CR29 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc43Q9CR29 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc43Q9CR29 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc43Q9CR29 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Gm10849-201ENSMUST00000100397 618 ntBASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc43Q9CR29 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc43Q9CR29 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc43Q9CR29 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Ccdc43Q9CR29 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc43Q9CR29 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc43Q9CR29 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms