Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Lsm7Q9CQQ8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Gm43183-201ENSMUST00000200632 547 ntBASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Gm42545-201ENSMUST00000202755 922 ntBASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm7Q9CQQ8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm7Q9CQQ8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Gm715-201ENSMUST00000117865 831 ntBASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Gm12382-201ENSMUST00000122005 922 ntBASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.12■□□□□ 0.49
Lsm7Q9CQQ8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm7Q9CQQ8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.1■□□□□ 0.49
Lsm7Q9CQQ8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms