Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska1Q9CPV1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ska1Q9CPV1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ska1Q9CPV1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.92■□□□□ 0.3
Ska1Q9CPV1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Gm8969-201ENSMUST00000199694 526 ntBASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ska1Q9CPV1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ska1Q9CPV1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ska1Q9CPV1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.89■□□□□ 0.29
Ska1Q9CPV1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ska1Q9CPV1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Tgds-204ENSMUST00000228543 1594 ntBASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ska1Q9CPV1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Reep4-203ENSMUST00000226563 1444 ntBASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Gm13146-201ENSMUST00000118508 780 ntBASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ska1Q9CPV1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ska1Q9CPV1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.86■□□□□ 0.29
Ska1Q9CPV1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ska1Q9CPV1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms