Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.44■□□□□ 0.86
Trim11Q99PQ2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim11Q99PQ2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim11Q99PQ2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Gm27405-201ENSMUST00000184201 112 ntBASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim11Q99PQ2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim11Q99PQ2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim11Q99PQ2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim11Q99PQ2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim11Q99PQ2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim11Q99PQ2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Trim11Q99PQ2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.39■□□□□ 0.85
Trim11Q99PQ2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms