Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim33Q99PP7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim33Q99PP7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim33Q99PP7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim33Q99PP7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trim33Q99PP7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.76■□□□□ 0.43
Trim33Q99PP7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.76■□□□□ 0.43
Trim33Q99PP7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.76■□□□□ 0.43
Trim33Q99PP7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim33Q99PP7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.75■□□□□ 0.43
Trim33Q99PP7 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.75■□□□□ 0.43
Trim33Q99PP7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim33Q99PP7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim33Q99PP7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim33Q99PP7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.74■□□□□ 0.43
Trim33Q99PP7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Gm44549-201ENSMUST00000208351 577 ntBASIC17.74■□□□□ 0.43
Trim33Q99PP7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim33Q99PP7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.73■□□□□ 0.43
Trim33Q99PP7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.73■□□□□ 0.43
Trim33Q99PP7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim33Q99PP7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.72■□□□□ 0.43
Trim33Q99PP7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim33Q99PP7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.72■□□□□ 0.43
Trim33Q99PP7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim33Q99PP7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim33Q99PP7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms