Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf2ird2Q99NI3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf2ird2Q99NI3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf2ird2Q99NI3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf2ird2Q99NI3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Gm15378-201ENSMUST00000121894 207 ntBASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.42■□□□□ 0.54
Gtf2ird2Q99NI3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf2ird2Q99NI3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Mtag2-201ENSMUST00000058665 714 ntBASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf2ird2Q99NI3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Gtf2ird2Q99NI3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gtf2ird2Q99NI3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf2ird2Q99NI3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Gm10698-201ENSMUST00000182663 604 ntBASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Gtf2ird2Q99NI3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms