Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Raf1Q99N57 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Raf1Q99N57 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.07■□□□□ 0.16
Raf1Q99N57 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Raf1Q99N57 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Gm13234-201ENSMUST00000120010 747 ntBASIC16.07■□□□□ 0.16
Raf1Q99N57 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.07■□□□□ 0.16
Raf1Q99N57 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Raf1Q99N57 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raf1Q99N57 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Raf1Q99N57 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.06■□□□□ 0.16
Raf1Q99N57 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.06■□□□□ 0.16
Raf1Q99N57 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raf1Q99N57 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.05■□□□□ 0.16
Raf1Q99N57 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.05■□□□□ 0.16
Raf1Q99N57 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.05■□□□□ 0.16
Raf1Q99N57 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Raf1Q99N57 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Raf1Q99N57 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.05■□□□□ 0.16
Raf1Q99N57 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Raf1Q99N57 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Raf1Q99N57 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.05■□□□□ 0.16
Raf1Q99N57 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raf1Q99N57 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raf1Q99N57 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raf1Q99N57 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raf1Q99N57 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.04■□□□□ 0.16
Raf1Q99N57 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.04■□□□□ 0.16
Raf1Q99N57 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Raf1Q99N57 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raf1Q99N57 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Raf1Q99N57 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raf1Q99N57 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raf1Q99N57 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raf1Q99N57 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raf1Q99N57 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raf1Q99N57 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Raf1Q99N57 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Raf1Q99N57 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Raf1Q99N57 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.03■□□□□ 0.16
Raf1Q99N57 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.03■□□□□ 0.16
Raf1Q99N57 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Raf1Q99N57 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Raf1Q99N57 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raf1Q99N57 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms