Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col25a1Q99MQ5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col25a1Q99MQ5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.58■□□□□ 0.56
Col25a1Q99MQ5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.58■□□□□ 0.56
Col25a1Q99MQ5 Gm13884-201ENSMUST00000118103 829 ntBASIC18.58■□□□□ 0.56
Col25a1Q99MQ5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.58■□□□□ 0.56
Col25a1Q99MQ5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Col25a1Q99MQ5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col25a1Q99MQ5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Col25a1Q99MQ5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Col25a1Q99MQ5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Col25a1Q99MQ5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Mir8098-201ENSMUST00000184011 137 ntBASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Gm10138-203ENSMUST00000206952 366 ntBASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Col25a1Q99MQ5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Gm7370-201ENSMUST00000219471 767 ntBASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Col25a1Q99MQ5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Gm27357-201ENSMUST00000183754 135 ntBASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Gm17808-201ENSMUST00000200859 894 ntBASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col25a1Q99MQ5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col25a1Q99MQ5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Gm15375-201ENSMUST00000119510 849 ntBASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col25a1Q99MQ5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Gm9013-201ENSMUST00000132939 882 ntBASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms