Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tlr3Q99MB1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tlr3Q99MB1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr3Q99MB1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Tlr3Q99MB1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Flg-201ENSMUST00000050758 1488 ntBASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Gm38285-201ENSMUST00000192928 922 ntBASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr3Q99MB1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Gm37856-201ENSMUST00000191634 999 ntBASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Trmt13-210ENSMUST00000198454 880 ntBASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Zfp783-201ENSMUST00000095946 670 ntBASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr3Q99MB1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Mir7071-201ENSMUST00000184847 69 ntBASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr3Q99MB1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms