Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.7■□□□□ 0.1
Scrt1Q99M85 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.7■□□□□ 0.1
Scrt1Q99M85 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Scrt1Q99M85 BC021767-201ENSMUST00000126387 1716 ntBASIC15.7■□□□□ 0.1
Scrt1Q99M85 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scrt1Q99M85 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scrt1Q99M85 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scrt1Q99M85 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Flg-201ENSMUST00000050758 1488 ntBASIC15.68■□□□□ 0.1
Scrt1Q99M85 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.68■□□□□ 0.1
Scrt1Q99M85 Gm11539-201ENSMUST00000119837 557 ntBASIC15.68■□□□□ 0.1
Scrt1Q99M85 Gm13436-201ENSMUST00000120418 567 ntBASIC15.68■□□□□ 0.1
Scrt1Q99M85 Gm13559-201ENSMUST00000120476 863 ntBASIC15.68■□□□□ 0.1
Scrt1Q99M85 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Gm6659-201ENSMUST00000174752 547 ntBASIC15.68■□□□□ 0.1
Scrt1Q99M85 Gm43183-201ENSMUST00000200632 547 ntBASIC15.68■□□□□ 0.1
Scrt1Q99M85 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.68■□□□□ 0.1
Scrt1Q99M85 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scrt1Q99M85 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.67■□□□□ 0.1
Scrt1Q99M85 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scrt1Q99M85 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.66■□□□□ 0.1
Scrt1Q99M85 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Gm7889-201ENSMUST00000185591 958 ntBASIC15.66■□□□□ 0.1
Scrt1Q99M85 Gm21814-202ENSMUST00000203277 873 ntBASIC15.66■□□□□ 0.1
Scrt1Q99M85 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.66■□□□□ 0.1
Scrt1Q99M85 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms