Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.88■□□□□ 0.45
Cstf1Q99LC2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Gm2274-201ENSMUST00000184539 609 ntBASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cstf1Q99LC2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cstf1Q99LC2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Gm7284-201ENSMUST00000131667 944 ntBASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Gm22697-201ENSMUST00000175194 63 ntBASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cstf1Q99LC2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cstf1Q99LC2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cstf1Q99LC2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cstf1Q99LC2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Cstf1Q99LC2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cstf1Q99LC2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Gm25016-201ENSMUST00000158399 131 ntBASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.83■□□□□ 0.44
Cstf1Q99LC2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cstf1Q99LC2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms