Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk9Q99J95 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk9Q99J95 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk9Q99J95 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk9Q99J95 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Gm8493-201ENSMUST00000196881 489 ntBASIC18.07■□□□□ 0.48
Cdk9Q99J95 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk9Q99J95 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Gm11421-201ENSMUST00000122124 294 ntBASIC18.06■□□□□ 0.48
Cdk9Q99J95 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.06■□□□□ 0.48
Cdk9Q99J95 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdk9Q99J95 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk9Q99J95 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cdk9Q99J95 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.04■□□□□ 0.48
Cdk9Q99J95 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk9Q99J95 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Gm27801-201ENSMUST00000184174 223 ntBASIC18.03■□□□□ 0.48
Cdk9Q99J95 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk9Q99J95 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.03■□□□□ 0.48
Cdk9Q99J95 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Smad6-203ENSMUST00000179458 273 ntBASIC18.02■□□□□ 0.48
Cdk9Q99J95 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms