Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.69■□□□□ 0.9
Rfc4Q99J62 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc4Q99J62 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfc4Q99J62 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.68■□□□□ 0.9
Rfc4Q99J62 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc4Q99J62 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Mir2861-201ENSMUST00000175539 82 ntBASIC20.67■□□□□ 0.9
Rfc4Q99J62 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Gm18032-201ENSMUST00000222541 538 ntBASIC20.67■□□□□ 0.9
Rfc4Q99J62 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc4Q99J62 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc4Q99J62 AA414768-201ENSMUST00000121924 1257 ntBASIC20.66■□□□□ 0.9
Rfc4Q99J62 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rfc4Q99J62 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 BC021767-201ENSMUST00000126387 1716 ntBASIC20.65■□□□□ 0.9
Rfc4Q99J62 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rfc4Q99J62 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Gm10517-202ENSMUST00000192970 758 ntBASIC20.65■□□□□ 0.9
Rfc4Q99J62 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.65■□□□□ 0.9
Rfc4Q99J62 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rfc4Q99J62 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc4Q99J62 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc4Q99J62 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc4Q99J62 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc4Q99J62 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Rfc4Q99J62 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc4Q99J62 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc4Q99J62 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc4Q99J62 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rfc4Q99J62 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc4Q99J62 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc4Q99J62 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc4Q99J62 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Mir5130-201ENSMUST00000175160 84 ntBASIC20.63■□□□□ 0.89
Rfc4Q99J62 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Gm6345-202ENSMUST00000180900 204 ntBASIC20.63■□□□□ 0.89
Rfc4Q99J62 Gm2274-201ENSMUST00000184539 609 ntBASIC20.63■□□□□ 0.89
Rfc4Q99J62 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.63■□□□□ 0.89
Rfc4Q99J62 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.63■□□□□ 0.89
Rfc4Q99J62 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms