Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1dQ99246 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1dQ99246 Gm3375-201ENSMUST00000203929 796 ntBASIC17.87■□□□□ 0.45
Cacna1dQ99246 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.87■□□□□ 0.45
Cacna1dQ99246 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1dQ99246 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1dQ99246 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.86■□□□□ 0.45
Cacna1dQ99246 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.86■□□□□ 0.45
Cacna1dQ99246 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.86■□□□□ 0.45
Cacna1dQ99246 Gm30025-201ENSMUST00000218555 728 ntBASIC17.86■□□□□ 0.45
Cacna1dQ99246 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.86■□□□□ 0.45
Cacna1dQ99246 Iqck-206ENSMUST00000208658 2891 ntBASIC17.86■□□□□ 0.45
Cacna1dQ99246 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Cacna1dQ99246 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1dQ99246 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cacna1dQ99246 Gm13559-201ENSMUST00000120476 863 ntBASIC17.84■□□□□ 0.45
Cacna1dQ99246 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Cacna1dQ99246 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1dQ99246 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1dQ99246 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Cacna1dQ99246 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cacna1dQ99246 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1dQ99246 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1dQ99246 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.83■□□□□ 0.45
Cacna1dQ99246 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.83■□□□□ 0.45
Cacna1dQ99246 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1dQ99246 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.83■□□□□ 0.44
Cacna1dQ99246 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1dQ99246 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1dQ99246 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1dQ99246 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1dQ99246 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1dQ99246 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.81■□□□□ 0.44
Cacna1dQ99246 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Cacna1dQ99246 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1dQ99246 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cacna1dQ99246 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1dQ99246 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Cacna1dQ99246 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms