Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc1bQ920F6 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.62■□□□□ 0.89
Smc1bQ920F6 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.61■□□□□ 0.89
Smc1bQ920F6 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.61■□□□□ 0.89
Smc1bQ920F6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.61■□□□□ 0.89
Smc1bQ920F6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.61■□□□□ 0.89
Smc1bQ920F6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc1bQ920F6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.6■□□□□ 0.89
Smc1bQ920F6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.6■□□□□ 0.89
Smc1bQ920F6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.6■□□□□ 0.89
Smc1bQ920F6 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.6■□□□□ 0.89
Smc1bQ920F6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc1bQ920F6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc1bQ920F6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc1bQ920F6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc1bQ920F6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc1bQ920F6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Smc1bQ920F6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc1bQ920F6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc1bQ920F6 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.59■□□□□ 0.89
Smc1bQ920F6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc1bQ920F6 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.59■□□□□ 0.89
Smc1bQ920F6 Gm7367-201ENSMUST00000057611 492 ntBASIC20.59■□□□□ 0.89
Smc1bQ920F6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc1bQ920F6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc1bQ920F6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc1bQ920F6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc1bQ920F6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc1bQ920F6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Smc1bQ920F6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc1bQ920F6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Smc1bQ920F6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc1bQ920F6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.58■□□□□ 0.88
Smc1bQ920F6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc1bQ920F6 Grk6-206ENSMUST00000224995 2971 ntBASIC20.58■□□□□ 0.88
Smc1bQ920F6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc1bQ920F6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc1bQ920F6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Smc1bQ920F6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc1bQ920F6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms