Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdha3Q91Y16 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Gm12527-201ENSMUST00000117967 564 ntBASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha3Q91Y16 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Gm2399-201ENSMUST00000104944 225 ntBASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Gm27011-201ENSMUST00000182352 972 ntBASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdha3Q91Y16 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha3Q91Y16 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Gm12896-201ENSMUST00000118430 226 ntBASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha3Q91Y16 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcdha3Q91Y16 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdha3Q91Y16 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms