Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha9Q91Y11 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha9Q91Y11 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha9Q91Y11 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.08■□□□□ 0.65
Pcdha9Q91Y11 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.08■□□□□ 0.65
Pcdha9Q91Y11 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Gm10653-202ENSMUST00000139570 835 ntBASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Gm20760-201ENSMUST00000179197 648 ntBASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdha9Q91Y11 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 Mir6349-201ENSMUST00000184059 97 ntBASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 Gm18666-201ENSMUST00000190039 958 ntBASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha9Q91Y11 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Mir2861-201ENSMUST00000175539 82 ntBASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha9Q91Y11 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Gm15375-201ENSMUST00000119510 849 ntBASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Grk6-206ENSMUST00000224995 2971 ntBASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha9Q91Y11 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha9Q91Y11 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms