Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhb8Q91XZ2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb8Q91XZ2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb8Q91XZ2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb8Q91XZ2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb8Q91XZ2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb8Q91XZ2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb8Q91XZ2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb8Q91XZ2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb8Q91XZ2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Gm13148-201ENSMUST00000118892 745 ntBASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Mir5133-201ENSMUST00000174955 77 ntBASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.46■□□□□ 0.39
Pcdhb8Q91XZ2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms